Author: Fred S. Roberts
Publisher: Prentice Hall
Mathematical models; Graphs; Applications of graphs; Weighted digraphs and pulse processes; Markov chains; n-Person games; Group decisionmaking; Measurement and utility; Index.
Models and Applications
Author: Lisa Sattenspiel
Publisher: Princeton University Press
The 1918-19 influenza epidemic killed more than fifty million people worldwide. The SARS epidemic of 2002-3, by comparison, killed fewer than a thousand. The success in containing the spread of SARS was due largely to the rapid global response of public health authorities, which was aided by insights resulting from mathematical models. Models enabled authorities to better understand how the disease spread and to assess the relative effectiveness of different control strategies. In this book, Lisa Sattenspiel and Alun Lloyd provide a comprehensive introduction to mathematical models in epidemiology and show how they can be used to predict and control the geographic spread of major infectious diseases. Key concepts in infectious disease modeling are explained, readers are guided from simple mathematical models to more complex ones, and the strengths and weaknesses of these models are explored. The book highlights the breadth of techniques available to modelers today, such as population-based and individual-based models, and covers specific applications as well. Sattenspiel and Lloyd examine the powerful mathematical models that health authorities have developed to understand the spatial distribution and geographic spread of influenza, measles, foot-and-mouth disease, and SARS. Analytic methods geographers use to study human infectious diseases and the dynamics of epidemics are also discussed. A must-read for students, researchers, and practitioners, no other book provides such an accessible introduction to this exciting and fast-evolving field.
Author: Fred Roberts
Publisher: Springer Science & Business Media
This IMA Volume in Mathematics and its Applications Applications of Combinatorics and Graph Theory to the Biological and Social Sciences is based on the proceedings of a workshop which was an integral part of the 1987-88 IMA program on APPLIED COMBINATORICS. We are grateful to the Scientific Committee: Victor Klee (Chairman), Daniel Kleitman, Dijen Ray-Chaudhuri and Dennis Stanton for planning and implementing an exciting and stimulating year long program. We especially thank the Workshop Organizers, Joel Cohen and Fred Roberts, for organizing a workshop which brought together many of the major figures in a variety of research fields connected with the application of combinatorial ideas to the social and biological sciences. A vner Friedman Willard Miller APPLICATIONS OF COMBINATORICS AND GRAPH THEORY TO THE BIOLOGICAL AND SOCIAL SCIENCES: SEVEN FUNDAMENTAL IDEAS FRED S. RoBERTS* Abstract. To set the stage for the other papers in this volume, seven fundamental concepts which arise in the applications of combinatorics and graph theory in the biological and social sciences are described. These ideas are: RNA chains as "words" in a 4 letter alphabet; interval graphs; competition graphs or niche overlap graphs; qualitative stability; balanced signed graphs; social welfare functions; and semiorders. For each idea, some basic results are presented, some recent results are given, and some open problems are mentioned.
Author: Joseph G. Rosenstein
Publisher: American Mathematical Soc.
This book provides teachers of all levels with a great deal of valuable material to help them introduce discrete mathematics into their classrooms.
Author: Leah Edelstein-Keshet
Mathematical Models in Biology is an introductory book for readers interested in biological applications of mathematics and modeling in biology. A favorite in the mathematical biology community, it shows how relatively simple mathematics can be applied to a variety of models to draw interesting conclusions. Connections are made between diverse biological examples linked by common mathematical themes. A variety of discrete and continuous ordinary and partial differential equation models are explored. Although great advances have taken place in many of the topics covered, the simple lessons contained in this book are still important and informative. Audience: the book does not assume too much background knowledge--essentially some calculus and high-school algebra. It was originally written with third- and fourth-year undergraduate mathematical-biology majors in mind; however, it was picked up by beginning graduate students as well as researchers in math (and some in biology) who wanted to learn about this field.
Author: Fred Brauer,Dawn Bies
Publisher: Springer Science & Business Media
The goal of this book is to search for a balance between simple and analyzable models and unsolvable models which are capable of addressing important questions on population biology. Part I focusses on single species simple models including those which have been used to predict the growth of human and animal population in the past. Single population models are, in some sense, the building blocks of more realistic models -- the subject of Part II. Their role is fundamental to the study of ecological and demographic processes including the role of population structure and spatial heterogeneity -- the subject of Part III. This book, which will include both examples and exercises, is of use to practitioners, graduate students, and scientists working in the field.
Mathematical Frameworks and Applications
Author: Robert B. Banks
Publisher: Springer Science & Business Media
Diffusion and growth phenomena abound in the real world surrounding us. Someexamples: growth of the world's population, growth rates of humans, public interest in news events, growth and decline of central city populations, pollution of rivers, adoption of agricultural innovations, and spreading of epidemics and migration of insects. These and numerous other phenomena are illustrations of typical growth and diffusion problems confronted in many branches of the physical, biological and social sciences as well as in various areas of agriculture, business, education, engineering medicine and public health. The book presents a large number of mathematical models to provide frameworks forthe analysis and display of many of these. The models developed and utilizedcommence with relatively simple exponential, logistic and normal distribution functions. Considerable attention is given to time dependent growth coefficients and carrying capacities. The topics of discrete and distributed time delays, spatial-temporal diffusion and diffusion with reaction are examined. Throughout the book there are a great many numerical examples. In addition and most importantly, there are more than 50 in-depth "illustrations" of the application of a particular framework ormodel based on real world problems. These examples provide the reader with an appreciation of the intrinsic nature of the phenomena involved. They address mainly readers from the physical, biological, and social sciences, as the only mathematical background assumed is elementary calculus. Methods are developed as required, and the reader can thus acquire useful tools for planning, analyzing, designing,and evaluating studies of growth transfer and diffusion phenomena. The book draws on the author's own hands-on experience in problems of environmental diffusion and dispersion, as well as in technology transfer and innovation diffusion.
Models, Analysis and Applications
Author: Sandip Banerjee
Publisher: CRC Press
Almost every year, a new book on mathematical modeling is published, so, why another? The answer springs directly from the fact that it is very rare to find a book that covers modeling with all types of differential equations in one volume. Until now. Mathematical Modeling: Models, Analysis and Applications covers modeling with all kinds of differential equations, namely ordinary, partial, delay, and stochastic. The book also contains a chapter on discrete modeling, consisting of differential equations, making it a complete textbook on this important skill needed for the study of science, engineering, and social sciences. More than just a textbook, this how-to guide presents tools for mathematical modeling and analysis. It offers a wide-ranging overview of mathematical ideas and techniques that provide a number of effective approaches to problem solving. Topics covered include spatial, delayed, and stochastic modeling. The text provides real-life examples of discrete and continuous mathematical modeling scenarios. MATLAB® and Mathematica® are incorporated throughout the text. The examples and exercises in each chapter can be used as problems in a project. Since mathematical modeling involves a diverse range of skills and tools, the author focuses on techniques that will be of particular interest to engineers, scientists, and others who use models of discrete and continuous systems. He gives students a foundation for understanding and using the mathematics that is the basis of computers, and therefore a foundation for success in engineering and science streams.
Author: Wai-Yuan Tan
Publisher: World Scientific
This book presents a systematic treatment of Markov chains, diffusion processes and state space models, as well as alternative approaches to Markov chains through stochastic difference equations and stochastic differential equations. It illustrates how these processes and approaches are applied to many problems in genetics, carcinogenesis, AIDS epidemiology and other biomedical systems. One feature of the book is that it describes the basic MCMC (Markov chain and Monte Carlo) procedures and illustrates how to use the Gibbs sampling method and the multilevel Gibbs sampling method to solve many problems in genetics, carcinogenesis, AIDS and other biomedical systems. As another feature, the book develops many state space models for many genetic problems, carcinogenesis, AIDS epidemiology and HIV pathogenesis. It shows in detail how to use the multilevel Gibbs sampling method to estimate (or predict) simultaneously the state variables and the unknown parameters in cancer chemotherapy, carcinogenesis, AIDS epidemiology and HIV pathogenesis. As a matter of fact, this book is the first to develop many state space models for many genetic problems, carcinogenesis and other biomedical problems. Contents:Discrete Time Markov Chain Models in Genetics and Biomedical SystemsStationary Distributions and MCMC in Discrete Time Markov ChainsContinuous-Time Markov Chain Models in Genetics, Cancers and AIDSAbsorption Probabilities and Stationary Distributions in Continuous-Time Markov Chain ModelsDiffusion Models in Genetics, Cancer and AIDSAsymptotic Distributions, Stationary Distributions and Absorption Probabilities in Diffusion ModelsState Space Models and Some Examples from Cancer and AIDSSome General Theories of State Space Models and Applications Readership: Graduate students and researchers in probability & statistics and the life sciences. Keywords:Stochastic;Genetics;Cancers;AIDS;Biomedical SystemsReviews:“Its strengths include the large number of models described, many of which have previously been published only in research journals; its clear presentation of many detailed analyses; and good accounts of the biology behind the models.”Mathematical Reviews
Author: Mondaini Rubem P
This is a book on interdisciplinary topics of the Mathematical and Biological Sciences. The treatment is both pedagogical and advanced in order to motivate research students as well as to fulfill the requirements of professional practitioners. There are comprehensive reviews written by senior experts on the important problems of growth and agglomeration in biology, on the algebraic modelling of the genetic code and on multi-step biochemical pathways. There are new results on the state of the art research in the pattern recognition of probability distribution of amino acids, on somitogenesis through reaction-diffusion models, on the mathematical modelling of infectious diseases, on the biophysical modelling of physiological disorders, on the sensitive analysis of parameters of malaria models, on the stability and hopf bifurcation of ecological and epidemiological models, on the viral infection of bee colonies and on the structure and motion of proteins. All these contributions are also strongly recommended to professionals from other scientific areas aiming to work on these interdisciplinary fields.
Author: Joseph DiStefano III
Publisher: Academic Press
Dynamic Systems Biology Modeling and Simuation consolidates and unifies classical and contemporary multiscale methodologies for mathematical modeling and computer simulation of dynamic biological systems – from molecular/cellular, organ-system, on up to population levels. The book pedagogy is developed as a well-annotated, systematic tutorial – with clearly spelled-out and unified nomenclature – derived from the author’s own modeling efforts, publications and teaching over half a century. Ambiguities in some concepts and tools are clarified and others are rendered more accessible and practical. The latter include novel qualitative theory and methodologies for recognizing dynamical signatures in data using structural (multicompartmental and network) models and graph theory; and analyzing structural and measurement (data) models for quantification feasibility. The level is basic-to-intermediate, with much emphasis on biomodeling from real biodata, for use in real applications. Introductory coverage of core mathematical concepts such as linear and nonlinear differential and difference equations, Laplace transforms, linear algebra, probability, statistics and stochastics topics; PLUS ....... The pertinent biology, biochemistry, biophysics or pharmacology for modeling are provided, to support understanding the amalgam of “math modeling” with life sciences. Strong emphasis on quantifying as well as building and analyzing biomodels: includes methodology and computational tools for parameter identifiability and sensitivity analysis; parameter estimation from real data; model distinguishability and simplification; and practical bioexperiment design and optimization. Companion website provides solutions and program code for examples and exercises using Matlab, Simulink, VisSim, SimBiology, SAAMII, AMIGO, Copasi and SBML-coded models. A full set of PowerPoint slides are available from the author for teaching from his textbook. He uses them to teach a 10 week quarter upper division course at UCLA, which meets twice a week, so there are 20 lectures. They can easily be augmented or stretched for a 15 week semester course. Importantly, the slides are editable, so they can be readily adapted to a lecturer’s personal style and course content needs. The lectures are based on excerpts from 12 of the first 13 chapters of DSBMS. They are designed to highlight the key course material, as a study guide and structure for students following the full text content. The complete PowerPoint slide package (~25 MB) can be obtained by instructors (or prospective instructors) by emailing the author directly, at: [email protected]
Author: Miklós Farkas
Publisher: Academic Press
Dynamic Models in Biology offers an introduction to modern mathematical biology. This book provides a short introduction to modern mathematical methods in modeling dynamical phenomena and treats the broad topics of population dynamics, epidemiology, evolution, immunology, morphogenesis, and pattern formation. Primarily employing differential equations, the author presents accessible descriptions of difficult mathematical models. Recent mathematical results are included, but the author's presentation gives intuitive meaning to all the main formulae. Besides mathematicians who want to get acquainted with this relatively new field of applications, this book is useful for physicians, biologists, agricultural engineers, and environmentalists. Key Topics Include: Chaotic dynamics of populations The spread of sexually transmitted diseases Problems of the origin of life Models of immunology Formation of animal hide patterns The intuitive meaning of mathematical formulae explained with many figures Applying new mathematical results in modeling biological phenomena Miklos Farkas is a professor at Budapest University of Technology where he has researched and instructed mathematics for over thirty years. He has taught at universities in the former Soviet Union, Canada, Australia, Venezuela, Nigeria, India, and Columbia. Prof. Farkas received the 1999 Bolyai Award of the Hungarian Academy of Science and the 2001 Albert Szentgyorgyi Award of the Hungarian Ministry of Education. A 'down-to-earth' introduction to the growing field of modern mathematical biology Also includes appendices which provide background material that goes beyond advanced calculus and linear algebra
Author: Trachette Jackson,Ami Radunskaya
This volume highlights problems from a range of biological and medical applications that can be interpreted as questions about system behavior or control. Topics include drug resistance in cancer and malaria, biological fluid dynamics, auto-regulation in the kidney, anti-coagulation therapy, evolutionary diversification and photo-transduction. Mathematical techniques used to describe and investigate these biological and medical problems include ordinary, partial and stochastic differentiation equations, hybrid discrete-continuous approaches, as well as 2 and 3D numerical simulation.
Mathematical Approaches to Culture Change
Author: Colin Renfrew,Kenneth L. Cooke
Category: Social Science
Transformations: Mathematical Approaches to Culture Change focuses on the application of contemporary mathematical techniques to the study of culture change and formulates problems in archaeology, anthropology, and historiography in such a way that they are susceptible to treatment of a mathematical kind. Mathematical models, extending from the almost purely quantitative methods of physics to the purely verbal conceptual explanations, are described. Emphasis is placed on catastrophe theoretic models that exemplify the use of soft mathematics in situations in which the use of hard quantitative models is not possible. Comprised of 21 chapters, this book begins with an overview of the role of mathematics in theoretical archaeology, followed by a discussion on two general categories of mathematical methods that seem to be suitable for modeling cultural transformations: methods of dynamical systems theory and methods that give greater emphasis on discrete entities and the structural relations or patterns among them. Subsequent chapters deal with the use of mathematics in history; morphogenesis in biological and social systems; simulation of the growth of hierarchies; and logistic trends in Southwest population growth. A reconstruction of political units in the Valley of Mexico during the Toltec period is also presented. This monograph will be of interest to archaeologists, anthropologists, historians, biologists, sociologists, and mathematicians.
Author: Fred Roberts,Barry Tesman
Publisher: CRC Press
Now with solutions to selected problems, Applied Combinatorics, Second Edition presents the tools of combinatorics from an applied point of view. This bestselling textbook offers numerous references to the literature of combinatorics and its applications that enable readers to delve more deeply into the topics. After introducing fundamental counting rules and the tools of graph theory and relations, the authors focus on three basic problems of combinatorics: counting, existence, and optimization problems. They discuss advanced tools for dealing with the counting problem, including generating functions, recurrences, inclusion/exclusion, and Pólya theory. The text then covers combinatorial design, coding theory, and special problems in graph theory. It also illustrates the basic ideas of combinatorial optimization through a study of graphs and networks.
Author: J. Mazumdar
Publisher: Cambridge University Press
A textbook about the mathematical modelling of biological and physiological phenomena for mathematically sophisticated students.
Theory and Applications
Author: Thomas W. Judson
Publisher: Orthogonal Publishing L3c
Abstract Algebra: Theory and Applications is an open-source textbook that is designed to teach the principles and theory of abstract algebra to college juniors and seniors in a rigorous manner. Its strengths include a wide range of exercises, both computational and theoretical, plus many non-trivial applications. The first half of the book presents group theory, through the Sylow theorems, with enough material for a semester-long course. The second-half is suitable for a second semester and presents rings, integral domains, Boolean algebras, vector spaces, and fields, concluding with Galois Theory.
Author: National Research Council,Division on Earth and Life Studies,Board on Life Sciences,Committee on a New Biology for the 21st Century: Ensuring the United States Leads the Coming Biology Revolution
Publisher: National Academies Press
Now more than ever, biology has the potential to contribute practical solutions to many of the major challenges confronting the United States and the world. A New Biology for the 21st Century recommends that a "New Biology" approach--one that depends on greater integration within biology, and closer collaboration with physical, computational, and earth scientists, mathematicians and engineers--be used to find solutions to four key societal needs: sustainable food production, ecosystem restoration, optimized biofuel production, and improvement in human health. The approach calls for a coordinated effort to leverage resources across the federal, private, and academic sectors to help meet challenges and improve the return on life science research in general.
Contemporary theory and application
Author: Gordon A. Fox,Simoneta Negrete-Yankelevich,Vinicio J. Sosa
Publisher: OUP Oxford
The application and interpretation of statistics are central to ecological study and practice. Ecologists are now asking more sophisticated questions than in the past. These new questions, together with the continued growth of computing power and the availability of new software, have created a new generation of statistical techniques. These have resulted in major recent developments in both our understanding and practice of ecological statistics. This novel book synthesizes a number of these changes, addressing key approaches and issues that tend to be overlooked in other books such as missing/censored data, correlation structure of data, heterogeneous data, and complex causal relationships. These issues characterize a large proportion of ecological data, but most ecologists' training in traditional statistics simply does not provide them with adequate preparation to handle the associated challenges. Uniquely, Ecological Statistics highlights the underlying links among many statistical approaches that attempt to tackle these issues. In particular, it gives readers an introduction to approaches to inference, likelihoods, generalized linear (mixed) models, spatially or phylogenetically-structured data, and data synthesis, with a strong emphasis on conceptual understanding and subsequent application to data analysis. Written by a team of practicing ecologists, mathematical explanations have been kept to the minimum necessary. This user-friendly textbook will be suitable for graduate students, researchers, and practitioners in the fields of ecology, evolution, environmental studies, and computational biology who are interested in updating their statistical tool kits. A companion web site provides example data sets and commented code in the R language.